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View Structure Prediction Details

Protein: cyp-33C2
Organism: Caenorhabditis elegans
Length: 495 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cyp-33C2.

Description E-value Query
Range
Subject
Range
gi|115496944, gi... - gi|94574282|gb|AAI16042.1| Cytochrome P450, family 2, subfamily C, polypeptide 18 [Bos taurus], gi|1...
399.0 [0..16] [493..20]

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Predicted Domain #1
Region A:
Residues: [1-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIILLLTVL TVYLVYELYW KRRNFPPGPC PLPVFGNLLS IANPPPGYEA FERWTKKYGD  60
   61 IYTFWIGNTP HIMINTWDKI KETYIRDAET YTNKVRLPAL DLFRGGEYGI IDSNGATWRE 120
  121 HRRFALSTMR DFGLGKNLMQ ENILMEVQDV FARLDAKLGS ETDIPEVFDH AVANVVNQLL 180
  181 FGYRFVGPKE SEYQELKRII EAPTDLFGKP HMFLAMNIPV IAKLMPEFMY EGPFKDFRDT 240
  241 AFAFFNKQIE AHRQEVDLND LNSESTDFVE TFLKEQKRRE SEGDSETFSN VQLSNVCMDL 300
  301 WFAGLNTTTN TITWAISYIL HHPEVQDKVH EEMDKVIGSD RLITTADKND LPYFNAFINE 360
  361 AQRGINIVPL NLQHATTRDT VINGFKIPKG TGVVAQISTV MNNEEVFPDP HTFNPDRFID 420
  421 EHGKLKRVEE LAPFSVGKRS CPGEGLARME LFLFIANFLN RYKIYPSKEG PPSMDKSNGA 480
  481 LIAPRLFSAT LKRRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 1pq2A
Description: Crystal Structure of Human Drug Metabolizing Cytochrome P450 2C8
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle