Protein: | dbl-1 |
Organism: | Caenorhabditis elegans |
Length: | 365 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dbl-1.
Description | E-value | Query Range |
Subject Range |
|
279.0 | [0..1] | [365..1] |
Region A: Residues: [1-114] |
1 11 21 31 41 51 | | | | | | 1 MNDSVRTTTT ISSTKSLVHS FQLSAILHLF LLISFTPMSA AADQHASHAT RRGLLRKLGL 60 61 EHVPVQTGPS IDVPQHMWDI YDDDNDVDWV RHYYPKEIIE DNEGFLLSYN LSLA |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [115-224] |
1 11 21 31 41 51 | | | | | | 1 ARNAHNEEVT KATLKLRLRR NNKARRSGNI SIYFFEDDIN NDRFQIESRS VDNLTEWIDF 60 61 DVTAAFLRRT NRISFFIDLP EDVEIEETQS SSLSSLPYAR AQSAPLIVFS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [225-365] |
1 11 21 31 41 51 | | | | | | 1 DLSEPSSVRR KRSAQTGNSE RKNRKKGRKH HNTEAESNLC RRTDFYVDFD DLNWQDWIMA 60 61 PKGYDAYQCQ GSCPNPMPAQ LNATNHAIIQ SLLHSLRPDE VPPPCCVPTE TSPLSILYMD 120 121 VDKVIVIREY ADMRVESCGC R |
Detection Method: | |
Confidence: | 40.0 |
Match: | 1bmpA |
Description: | BONE MORPHOGENETIC PROTEIN-7 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
receptor binding | 4.70889547404918 | bayes_pls_golite062009 |
cytokine activity | 3.61376517935324 | bayes_pls_golite062009 |
growth factor activity | 3.55277889903829 | bayes_pls_golite062009 |
platelet-derived growth factor binding | 3.43601005070198 | bayes_pls_golite062009 |
protein binding | 3.16282476674164 | bayes_pls_golite062009 |
cell surface binding | 2.9725198156666 | bayes_pls_golite062009 |
binding | 2.37954321554411 | bayes_pls_golite062009 |
receptor serine/threonine kinase binding | 2.01478614969692 | bayes_pls_golite062009 |
vascular endothelial growth factor receptor 1 binding | 1.87722086999547 | bayes_pls_golite062009 |
transmembrane receptor protein serine/threonine kinase binding | 1.87074199164241 | bayes_pls_golite062009 |
transforming growth factor beta receptor binding | 1.87074199164241 | bayes_pls_golite062009 |
type II transforming growth factor beta receptor binding | 1.74489645820593 | bayes_pls_golite062009 |
glycosaminoglycan binding | 1.67879530820663 | bayes_pls_golite062009 |
collagen binding | 1.64555624988816 | bayes_pls_golite062009 |
protein dimerization activity | 1.44846386076063 | bayes_pls_golite062009 |
vascular endothelial growth factor receptor 2 binding | 1.44790236067538 | bayes_pls_golite062009 |
vascular endothelial growth factor receptor binding | 1.43930353468665 | bayes_pls_golite062009 |
hormone activity | 1.39628583804208 | bayes_pls_golite062009 |
heparin binding | 1.30997160523692 | bayes_pls_golite062009 |
growth factor binding | 1.28535209856904 | bayes_pls_golite062009 |
glial cell line-derived neurotrophic factor receptor binding | 1.16821412683065 | bayes_pls_golite062009 |
polysaccharide binding | 1.16191864095271 | bayes_pls_golite062009 |
protein homodimerization activity | 1.13743310822539 | bayes_pls_golite062009 |
platelet-derived growth factor receptor binding | 1.12951786832285 | bayes_pls_golite062009 |
identical protein binding | 1.0030262164995 | bayes_pls_golite062009 |
pattern binding | 0.90497366619649 | bayes_pls_golite062009 |
neurotrophin receptor binding | 0.81172494974121 | bayes_pls_golite062009 |
protein heterodimerization activity | 0.408562885230686 | bayes_pls_golite062009 |
transcription activator activity | 0.140318739604937 | bayes_pls_golite062009 |
fibronectin binding | 0.1110090445978 | bayes_pls_golite062009 |
catalytic activity | 0.105223830172599 | bayes_pls_golite062009 |
carbohydrate binding | 0.0235054088545197 | bayes_pls_golite062009 |