| Protein: | tsp-15 |
| Organism: | Caenorhabditis elegans |
| Length: | 258 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tsp-15.
| Description | E-value | Query Range |
Subject Range |
|
|
217.0 | [0..6] | [257..2256] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MGALGDSAYG ARGRLIKFSY IVTALISILF SISCICYGIW LLARRSQYAE LVSPSLYVDV 60
61 GRILVIISIL SILNYLICFY AIFKEMRCFV TSCAVASIVI AVMLIIGGCI GLNFRDQLTH 120
121 YTPLNLKML
|
| Detection Method: |  |
| Confidence: | 1.01 |
| Match: | 1oedC |
| Description: | Acetylcholine receptor protein, delta chain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [130-258] |
1 11 21 31 41 51
| | | | | |
1 TSLRELYGTH DMKGITESWD ALQSNFKCCG VNGTDNAQIW KTSKWYMHQR APKLLIPESC 60
61 CIPSEIERCR SNPFDQDAPP PYYTSTCYEP LQNDLLHVMN VASWLCITNA IVQIIPSVAG 120
121 CWYSKLIRK
|
| Detection Method: | |
| Confidence: | 1.67 |
| Match: | 1g8qA |
| Description: | CD81 extracellular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.273522264617444 | bayes_pls_golite062009 |
