| Protein: | dsl-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 263 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dsl-3.
| Description | E-value | Query Range |
Subject Range |
|
|
220.0 | [0..9] | [263..1500] |
|
Region A: Residues: [1-263] |
1 11 21 31 41 51
| | | | | |
1 MIKVIFALFL AFQQITCSGY LELYFQSEFH LKATVNITSC STTAPPTLIP LMISSNETVK 60
61 MHKVPMKMDG SEYQITIFVI NQDRLDIDNA TITTSFVPKN GQISPLTVMF PFTGIRMRVG 120
121 CDEQWHGEKC DVFCCSETAS RVGKVCNSHG QLGCPQGKRG LDCALPISKK WCKCQNNGAC 180
181 ISSFGKNLHE KMQCECQLGF RGSHCEERVD NIEMKSTYGV DPKKFEIATA KMLYESVVDN 240
241 ELVEVKRERT GGHFLQNLRI NDQ
|
| Detection Method: |  |
| Confidence: | 10.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.44119144078508 | bayes_pls_golite062009 |
| receptor binding | 1.40618339011373 | bayes_pls_golite062009 |
| protein binding | 1.15716342217655 | bayes_pls_golite062009 |
| growth factor activity | 0.25853515067422 | bayes_pls_golite062009 |
