| Protein: | paqr-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 434 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for paqr-1.
| Description | E-value | Query Range |
Subject Range |
|
|
451.0 | [0..1] | [434..1] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MNPDEVNRAL GHYLNDADSG ELVVEDSTTV QVKNPEARKT GDKIEVFYSR KTTVVSPTNS 60
61 DDEDADFCSD SELLPQQEGH RSRATSFAGR IRAGSDDEAM PKHTILRYRR KKGGQWREIN 120
121 LQGTPDKRKD DEDELEVDVK EDRSEQTGIV TKTYEARWKV LKYEHLPEWL QDNEFLRHGH 180
181 RPPLPSFSEC FKSIWSL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [198-434] |
1 11 21 31 41 51
| | | | | |
1 HTETGNIWTH LIGCVAFFFL ACWFLTRPDN HIQFQEKVVF SFFFAGAVLC LGLSFAFHTL 60
61 SCHSVNVVKI FCKLDYMGIS LLIIGSFIPW IYYGFYCRRE PKITYIAMVS VLGIGAIVVS 120
121 LWDKFSESRF RPIRAAVFVG MGCSGVIPTI HYIITDGVHS LFADNSFHWL LLMAFLYLLG 180
181 AGLYATRTPE RFFPGKCDIW FQSHQLFHTC VVIAAFVHYY GISEMAFARL NEQCPVR
|
| Detection Method: | |
| Confidence: | 9.39794 |
| Match: | 1occA |
| Description: | Mitochondrial cytochrome c oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
