| Protein: | CE27893 |
| Organism: | Caenorhabditis elegans |
| Length: | 465 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27893.
| Description | E-value | Query Range |
Subject Range |
|
|
323.0 | [0..7] | [463..52] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MMQDTKDEHL TSFAENPTKS VERDALVEPQ FTRPEQVEKT HVEEAKWPWG KGKKNENFRM 60
61 PRFLVTILLI CLLVAALLIA LIAIVWALN
|
| Detection Method: |  |
| Confidence: | 4.69897 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [90-465] |
1 11 21 31 41 51
| | | | | |
1 SNSASVREPE IVYTIPSRDN QKDNVVHARS NIPKTLKKSL DLLEEDTTTI TTTTSQTPDD 60
61 YDTTEPFVEE EEYHLEEATE HHEIATIEAT TPEPSEIATK KPIIYYSPPT TPKTTTSTGY 120
121 LQFYDSIDGD ASDNCLERLA LGSPSGVYSI QSVEKFQAFC DMDTTTGGWT VIQRRVDGDG 180
181 SFHRGTMKKF VEGFGNLQGS HWLGLEKLHN LAPIGATPAI LRIEIQGETC DLTCSKRFAN 240
241 TWVGEWKVNF GKKQDGYKIQ ITEEGVGNLT YNGVDPFFGA NGRRFSTNDN DQDENTFMNC 300
301 AQFRMVGPWW HPKSCSDVGL NGYFQTTSEK YDVKDRNQNA KRYFVWAFDK QIYNGYPYTI 360
361 HVRKSTMLLK TGDPQR
|
| Detection Method: | |
| Confidence: | 64.0 |
| Match: | 1ei3B |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 1.9776581053362 | bayes_pls_golite062009 |
| eukaryotic cell surface binding | 1.88588139563708 | bayes_pls_golite062009 |
| integrin binding | 1.84403663032634 | bayes_pls_golite062009 |
| carbohydrate binding | 1.60481550486624 | bayes_pls_golite062009 |
| cell surface binding | 1.53370693640531 | bayes_pls_golite062009 |
| binding | 0.811708735919118 | bayes_pls_golite062009 |
| polysaccharide binding | 0.578727264859991 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 0.27731523067605 | bayes_pls_golite062009 |
| protein binding | 0.249736491712423 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor binding | 0.10959185189203 | bayes_pls_golite062009 |
