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View Structure Prediction Details

Protein: unc-87
Organism: Caenorhabditis elegans
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-87.

Description E-value Query
Range
Subject
Range
gi|187029359, gi... - gi|39595815|emb|CAE67318.1| Hypothetical protein CBG12778 [Caenorhabditis briggsae], gi|187029359|em...
gi|157747765 - gi|157747765|ref|XP_001668977.1| Hypothetical protein CBG12778 [Caenorhabditis briggsae AF16]
378.0 [0..2] [374..176]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPTEDQVVA EEQPNATMET KVTGQGQPKR VGRWTLAQLR QTDGIIPSQA GWNKGDSQKL  60
   61 MTNFGTPRNT NTRVKSENLQ EIPEDIANRT HGEVRLQSGT NKYCSQRGMT GFGSGRDVCR 120
  121 EGVRVAQNPA DLAELPEEKI RMSEGIVRLQ AGTNKYDSQK GMT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFGTGRRETT KMVDSKHPEY DHEKPDQSEI PLQSGTNKFA SQKGMTGFGT ARRETTKMVD  60
   61 SNHPDYSHEC SIDQTTIPSQ MGSNQYASQK GMTGFGQPRW EVLDPSISWQ NRKSQGMVRL 120
  121 QSGTNRFASQ AGMIGFGTCR NTTFEAEGGE LPYEAMKVSE TIIPSQAGWN KGDSQKKMTS 180
  181 FGAPRDVKGK HLKRIWELEY PEEAEISLDR L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.221849
Match: 1wymA
Description: Solution structure of the CH domain of human transgelin-2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle