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View Structure Prediction Details

Protein: ins-1
Organism: Caenorhabditis elegans
Length: 109 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ins-1.

Description E-value Query
Range
Subject
Range
gi|187032733, gi... - gi|39583716|emb|CAE63820.1| Hypothetical protein CBG08370 [Caenorhabditis briggsae], gi|187032733|em...
gi|157758615 - gi|157758615|ref|XP_001671651.1| Hypothetical protein CBG08370 [Caenorhabditis briggsae AF16]
179.0 [0..1] [107..1]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYWFRQVYRP SFFFGFLAIL LLSSPTPSDA SIRLCGSRLT TTLLAVCRNQ LCTGLTAFKR  60
   61 SADQSYAPTT RDLFHIHHQQ KRGGIATECC EKRCSFAYLK TFCCNQDDN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.28
Match: 3lriA
Description: Insulin-like growth factor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
insulin receptor binding 2.7278725657614 bayes_pls_golite062009
insulin-like growth factor receptor binding 2.52789753864303 bayes_pls_golite062009
receptor binding 1.96314913282044 bayes_pls_golite062009
binding 1.53606661868923 bayes_pls_golite062009
protein binding 1.03308976416246 bayes_pls_golite062009
growth factor activity 0.882616311405838 bayes_pls_golite062009
protein complex binding 0.391427446215436 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle