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View Structure Prediction Details

Protein: odr-2
Organism: Caenorhabditis elegans
Length: 173 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for odr-2.

Description E-value Query
Range
Subject
Range
gi|157764244 - gi|157764244|ref|XP_001674465.1| Hypothetical protein CBG19083 [Caenorhabditis briggsae AF16]
gi|187024343, gi... - gi|39594426|emb|CAE72004.1| Hypothetical protein CBG19083 [Caenorhabditis briggsae], gi|187024343|em...
241.0 [0..1] [173..1]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADVLQIVS YLLANVSDFN SALRLPCYSC MSPYLEDHYP YISHLYRKPL SFDTHCDKHS  60
   61 LETSYLYSKN CSDMCVTLRI NDVVGGRRRH GYMRGCLSDL HGYNHSLIRT LAERQGCLDT 120
  121 TARELFLPTA QRQELEPSRL SLCACHNNLC NFSVSPPCFF IFLFVILVIF LMR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.994
Match: 1ywhA
Description: crystal structure of urokinase plasminogen activator receptor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle