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View Structure Prediction Details

Protein: odr-2
Organism: Caenorhabditis elegans
Length: 201 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for odr-2.

Description E-value Query
Range
Subject
Range
odr-2 - status:Confirmed UniProt:Q9BMH9 protein_id:AAK68881.1
213.0 [0..50] [201..26]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLPLSSLHP MGLLFRLLLF WNTIVLAARE RSNTEYWKDQ HPQQRWRIYS LRLPCYSCMS  60
   61 PYLEDHYPYI SHLYRKPLSF DTHCDKHSLE TS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YLYSKNCSDM CVTLRINDVV GGRRRHGYMR GCLSDLHGYN HSLIRTLAER QGCLDTTARE  60
   61 LFLPTAQRQE LEPSRLSLCA CHNNLCNFSV SPPCFFIFLF VILVIFLMR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.11
Match: 2hlqA
Description: No description for 2hlqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle