| Protein: | sra-12 |
| Organism: | Caenorhabditis elegans |
| Length: | 327 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-12.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..4] | [306..357] |
|
Region A: Residues: [1-327] |
1 11 21 31 41 51
| | | | | |
1 MGCASEIQAE IFTSFGQLFY ASFQTILFLA TIIGSLLAIF ELCKKTTVPD STRVLLIGSL 60
61 FFANAHEFAY FTAPLKVFQL NIFNTNTSCY PLISTRDCIP TTTVLAMGIS GNMLIQSALS 120
121 IDRLLATIFP FSYSRMRALP GFVLLIMVLI PAMFTYSWIR LDIVLDDYQM FCSQWSANIS 180
181 TRANTFLEIC SYLTVAHIII NCLIILRNRA IEKRCRFDVT QRYLTSENLK TTQAICYLSI 240
241 AQFLAMFMYS GGVLLMRKNR ENIPTLIYFN VIVWVYAPPY ACVSLAPLIL FSLWNLKKQR 300
301 HIQIKSVQSA QKETQDDYIR KLQKSWK
|
| Detection Method: |  |
| Confidence: | 45.09691 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
