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View Structure Prediction Details

Protein: mtm-1
Organism: Caenorhabditis elegans
Length: 588 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mtm-1.

Description E-value Query
Range
Subject
Range
gi|37926574, gi|... - gi|37926575|pdb|1M7R|B Chain B, Crystal Structure Of Myotubularin-Related Protein-2 (Mtmr2) Complexe...
723.0 [0..5] [586..58]

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Predicted Domain #1
Region A:
Residues: [1-588]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDRGNNSGE VGEFASSSMI QESIDLKLLA AESLIWTEKN VTYFGPLGKF PGKIVITRYR  60
   61 MVFLVGDGGK MYEQWKLDIP LGQVSRIEKV GRKTTSVAKR GDDNYGFTIY CKDYRVYRFT 120
  121 CNPASSDRKN VCDSLNRYAF PLSHNLPMFA SVHAAETPRL MKDGWKIYSA EKEYERLGIP 180
  181 NSRLWKEVDI NKDYKFSETY PRTFVIPTVS WEEGKPFVKK LGEFRSKERI PVLSWINQTT 240
  241 LASISRCSQP MTGISGKRSA EDERHLTNIM NANANCRELL ILDARPAVNA KLNKAKGGGY 300
  301 EENYVNAPLT FLNIHNIHVV RDSLKRLLAA LIPRVDEKGY YKALDESKWL NHVQSILEGA 360
  361 VKAVFNVDTE KQSVLIHCSD GWDRTAQLTS LAMIQLDSYY RTIEGFIVLI EKEWCSFGHK 420
  421 FGERIGHGDD NYSDGERSPV FVQFCDCLWQ IMRQFPWAFE FTQELLICML DELYACRYGT 480
  481 FLYNSEKIRL KDKKCDETTI SFWSYVLENK KKFRNPMFKH GKSNKVINVN PSLCGLHVWI 540
  541 DYYARSNPYV VTPNHEDVQQ PGAQFVDEKK QLLDEIMALD DAAQKLTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1lw3A
Description: Crystal Structure of Myotubularin-related protein 2 complexed with phosphate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.30669036331612 bayes_pls_golite062009
phosphatase activity 7.03758345564381 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.82821455971597 bayes_pls_golite062009
protein tyrosine phosphatase activity 6.07449851643404 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.83769298632658 bayes_pls_golite062009
transmembrane receptor protein phosphatase activity 4.57221148210263 bayes_pls_golite062009
transmembrane receptor protein tyrosine phosphatase activity 4.57221148210263 bayes_pls_golite062009
lipid phosphatase activity 4.03975183132282 bayes_pls_golite062009
protein tyrosine/serine/threonine phosphatase activity 2.77531895423367 bayes_pls_golite062009
phosphatidylinositol-3-phosphatase activity 2.60529675907066 bayes_pls_golite062009
phosphatidylinositol trisphosphate phosphatase activity 2.05577133553311 bayes_pls_golite062009
transmembrane receptor activity 1.9728915436342 bayes_pls_golite062009
protein serine/threonine phosphatase activity 1.95004535887255 bayes_pls_golite062009
signal transducer activity 1.82459113680471 bayes_pls_golite062009
molecular transducer activity 1.82459113680471 bayes_pls_golite062009
receptor activity 1.80988489233673 bayes_pls_golite062009
phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity 1.72084618199574 bayes_pls_golite062009
hydrolase activity 1.69828702692962 bayes_pls_golite062009
phosphatidylinositol bisphosphate phosphatase activity 1.51576958903553 bayes_pls_golite062009
binding 1.42026750513729 bayes_pls_golite062009
transporter activity 1.21792561830727 bayes_pls_golite062009
inositol or phosphatidylinositol phosphatase activity 1.1200449509328 bayes_pls_golite062009
protein binding 1.07441758584517 bayes_pls_golite062009
catalytic activity 1.06283028154109 bayes_pls_golite062009
transmembrane transporter activity 1.00030784939308 bayes_pls_golite062009
non-membrane spanning protein tyrosine phosphatase activity 0.724257798127697 bayes_pls_golite062009
receptor binding 0.576374232132305 bayes_pls_golite062009
kinase activity 0.541255358115631 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.532875179381704 bayes_pls_golite062009
substrate-specific transporter activity 0.48365008254428 bayes_pls_golite062009
protein kinase activity 0.44918511259618 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.359793029026564 bayes_pls_golite062009
GTPase regulator activity 0.355387992614734 bayes_pls_golite062009
nucleoside-triphosphatase regulator activity 0.335498703113274 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.24539676571154 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase signaling protein activity 0.13700176999256 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle