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View Structure Prediction Details

Protein: CE31453
Organism: Caenorhabditis elegans
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31453.

Description E-value Query
Range
Subject
Range
gi|73971626 - gi|73971626|ref|XP_538811.2| PREDICTED: similar to Tenascin precursor (TN) (Hexabrachion) (Cytotacti...
284.0 [0..20] [448..1824]

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Predicted Domain #1
Region A:
Residues: [1-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKETVSLLL TFACGILVSA DTSQYFQVLI REIDNPSGNI FDGTSCSPFR FTGYGCNTYL  60
   61 TGGVAAGPTL NNSFTNTQLN FHGETKIDNL NLIVNDIYAK DVSEFTGFSV SFILKTADGG 120
  121 IIDEYSFRVN TTENQGVYVY NSVRPGTLST TISIAWATNI PPPSETTTTE ITGTTPTPGP 180
  181 TEPPTTTAKL PSDCDEVEST SSGLQTIYPD GSTPVSVYCD RKNSAGAYTI IQSRGREGSN 240
  241 ITFDIPFANY SDWFGESGVG KNFWLGLDNM NNLSTNGKTY SLQIDLCCGT QLMAKQLYTN 300
  301 FKVATKAEQY ALTASADLPG IGLDYSSSAK DLGAPFSTQL TYSLPKGKAE CDQFEFYDDD 360
  361 NGGAGPSKGY GGWWYGSCGN NLNGFLYPNN NGDCSVTKFD STLLLGINMR TTTGTATGGY 420
  421 DVDLISYDRV RMALFTFDTT LIDRTDSSFC N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.0
Match: 1ei3B
Description: Fibrinogen
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle