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View Structure Prediction Details

Protein: CE31979
Organism: Caenorhabditis elegans
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31979.

Description E-value Query
Range
Subject
Range
PGAM5_CAEBR - Phosphoglycerate mutase family member 5 homolog OS=Caenorhabditis briggsae GN=CBG13006 PE=3 SV=1
gi|157750598 - gi|157750598|ref|XP_001679011.1| Hypothetical protein CBG13006 [Caenorhabditis briggsae AF16]
230.0 [0..1] [284..1]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSKIIKLGV PTATLAVGTL LLGDDEKRSA FFRTASAFTQ NHGHKTFDEH FPRGEWDKNW  60
   61 DFRDPISLVD KGKWEKADEE GKKKLIEEKK ATA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRNIFLIRHG QYHLDHEVKM LTPLGREQAE LLGKRLANSD IKFTNMTMST MVRATETANI  60
   61 ILKHLPDDLT RTSSPFIEEG PPYPPVPDHK TWRPLDPEFY TEAARIESAY RKIFHRASPS 120
  121 QKEDSFELIV CHANVIRYFI CRALQFPPEG WLRMSLGNCS LTWITIRPKG HVSVRSIGDI 180
  181 GHLPPNKISF T

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.39794
Match: 1xq9A
Description: Structure of Phosphoglycerate Mutase from Plasmodium falciparum at 2.6 Resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.84708627579827 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle