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View Structure Prediction Details

Protein: inx-19
Organism: Caenorhabditis elegans
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-19.

Description E-value Query
Range
Subject
Range
inx-19 - status:Confirmed UniProt:O61715 protein_id:AAO21399.1
461.0 [0..17] [454..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRTPASTGP LRQDRQMFFH ATLARSFINA LSVRGDDDAV DRLNYYYTPL ILAVCCLVIS  60
   61 AKQYGGTPIE CWVNPHSRES MEEYIESYCW IQNTYWIPMY ENVPDDHTAR EEKQIGYYQW 120
  121 VPFILIAEAL MFSLPCIFWR LC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFQSGLNIQT LINAACDGQA LLDASDRQKA VEAITTNFVD NLDLQSPNGR IRARGWIARI  60
   61 KFSRFLSGQC LSILHSFTKL LY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [225-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SMNVVAQFLI LNACLKSSDF LFFGFQVLND IWAGRPWTET GHFPRVTLCD FEVRYLANLN  60
   61 RYTVQCALLI NIINEKVFAF LWCWYMILAI ITTCSFIYWI ANSFIHSEKV DYVMKFIQIA 120
  121 ESSEFKKLQK FEKDATV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [362-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERLYTVIAFA PHLLDTFVSD FLKSDGVLML RMISNHAGDM IVVQLVRNLW QEFRERNWRE  60
   61 FEEHEEMKDV EMRRIHGGER IVISNPGQTK SFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle