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View Structure Prediction Details

Protein: CE32049
Organism: Caenorhabditis elegans
Length: 179 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32049.

Description E-value Query
Range
Subject
Range
gi|83720943, gi|... - gi|83720943|ref|YP_443562.1| ribosomal protein L14 [Burkholderia thailandensis E264], gi|83654768|gb...
170.0 [0..8] [179..6]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLPSSSGM FSRLLANVFN TTVASRCSAS GRWWPQPEYE LSKHRSRAPS MGIHRRTRLN  60
   61 VVDNSALGKE ADTTGKLPYC IHVYKQGRRA KHMPHAELGD KILVAIRGQM RKAYVVGANT 120
  121 HVHYRKHGVP VTDQNMIVLL DEEGNPLGNR ITAPIPTKLM ANRGNVQFSK VLALANKFI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.221849
Match: 1vsaI
Description: No description for 1vsaI was found.

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 1.60200101900475 bayes_pls_golite062009
structural molecule activity 1.54319444037217 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle