| Protein: | CE32237 |
| Organism: | Caenorhabditis elegans |
| Length: | 544 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32237.
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..9] | [493..1404] |
|
Region A: Residues: [1-444] |
1 11 21 31 41 51
| | | | | |
1 MSKQPIDGPL DAEKKEVTVA VTAAENFEEQ VEEVGKVTPP DGGYGWVVVA ASFLVNMAVD 60
61 GVIYTCGKIL VPIWADQFGS TSVAGAVISI LTGCYYLAGP LASSFVNVFG IRSVAIAGSI 120
121 LATTAFLLSR FASTIWELYL LFGVLGGIGF GCMYLPSIVI LSTYFAKKRS VATGIAVCGS 180
181 GIGTMVFSTI NGPVFDYFGK DVGSFMVYLA AIAISGSLFS LLFAPLKATE HQVKKVAKMV 240
241 RNYEGKPEEP TQRLLEDVRN DLEELNRPGH NADTFYAGNA PVSRSRSNTL DRKAAESAEA 300
301 HVVHATEHHT VHHVVKKSKF TKFKESLCSV LDKDLLFSPS FMTLAVSGTF TVLSFLVPFV 360
361 YLALAMKQKN PDFTDAELSL PVTLIGAFNI MFRIGCGMVA DHPKMSALQV SNVATIIAGT 420
421 SMLFVPFCTE LWHYVVFCIP FSAG
|
| Detection Method: |  |
| Confidence: | 16.30103 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| binding | 0.805286077372817 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [445-544] |
1 11 21 31 41 51
| | | | | |
1 VACFAALRSV ICVELIGVEK LSNAFGILMV FMGIGAVVGG PIAAQIKDIT GNYDISFYVM 60
61 GIIFAFSGVM TIRLPELKAW EESKKLARAG TEMRVISEAS
|
| Detection Method: | |
| Confidence: | 1.9 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 3.82096685159505 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.34396155292818 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.32643461660963 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.2506965512085 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.05049771748124 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.02370427376594 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.62538016506437 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.46819549608723 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 0.869150152038001 | bayes_pls_golite062009 |
| binding | 0.816478136738584 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.222664452597504 | bayes_pls_golite062009 |
