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View Structure Prediction Details

Protein: CE32634
Organism: Caenorhabditis elegans
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32634.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
522.0 [0..2] [454..1196]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEILDRTYG AQFPEELECH LDLQNASANC CKFNRWGSIV AVGCTDGRVL IYDFMTRNIA  60
   61 RTFSAHCLPV SCLSWSRDGR KLLTSSADNS IAMFDVLAGT LLHRIRFNSM VTFAMFHPRN 120
  121 DNKAIVLQVN KQPTVEQFSP RIQTVLANDT PGSSDESASC VSYDRKGKYI IAGTGKGKLL 180
  181 IYNAETLKCV AWCKQNTVQQ IRQIIVPMKS RFIITNTQDR VIRTYELEDL LHQRGQMVEA 240
  241 KYKVLDMVNK AAWKNVCTDS DGLYVCGAST KAHSLYIWES NTGSLIKILH GNKGEALLDV 300
  301 QWHPTRPIIL SIAQGTVSMW TQAHVENWSA FA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.39794
Match: 2gnqA
Description: No description for 2gnqA was found.

Predicted Domain #2
Region A:
Residues: [333-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEFQELEENE KYIEKENEFD MEDEDADEDM TSKSQDAEDD IIDVVNVRPE DYLASSDEED  60
   61 CNIMKPARNL ESGPLWYIPV PLDIENADND QRLPDDIRNL DNLLNPAWVA SAKGYELSPK 120
  121 SK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 1ri6A
Description: Structure of a putative isomerase from E. coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle