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View Structure Prediction Details

Protein: CE33325
Organism: Caenorhabditis elegans
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33325.

Description E-value Query
Range
Subject
Range
gi|68389434 - gi|68389434|ref|XP_691920.1| PREDICTED: similar to solute carrier family 17 (sodium-dependent inorga...
244.0 [0..2] [374..135]

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Predicted Domain #1
Region A:
Residues: [1-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRPWGNYYR WIIVGVGFLC LTSICSNFIV INFTFICMKN DMSDAVTDSN GTLRSIYDYN  60
   61 GSEKKWILWA VALGTMLGTV PINMLYVKYG ARLPFFIAGL TSIISTALIP WAAGFNYWIL 120
  121 ILLRFCQGLA YSADFAAIGL ITVRWAPLTE TATFIAVMTS FTGISSVATN SVTGVICESS 180
  181 YGWKYSYYLH AIVGLLLFVL WYIVYIDHPQ DTKRVSCKEL TKIEKSKSAA HLDKSTDVPY 240
  241 RKLLTSPVIW CVWLNAFFEM SAVIVCSTYM PIYFHEVLKF GVTETGFWVA LVLFIWLPVR 300
  301 WVAAVLSDKI RCIGELPKIL IFNTIAVGGT GAFFAVIGFI PAENKYWSVA AFTMTMCCVG 360
  361 VNSGGFYKCG VLHAR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.69897
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle