| Protein: | sra-27 |
| Organism: | Caenorhabditis elegans |
| Length: | 344 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-27.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..14] | [329..353] |
|
Region A: Residues: [1-344] |
1 11 21 31 41 51
| | | | | |
1 MAMYTNQTAE ELETWRCTSD GIFKSQNSIW MKINFVFVFI LIFLTFYLSF KAARVLKNHN 60
61 VYSKGSQILL MITLLNANLN QLIFLEIRIR HLVHIFINSE DPCKIEFHSP ECTYDQTIYA 120
121 FTSVMSTGLL SALTFDRFFA LYASTVYVRN SKDSAYMLIT VSIIVTVIVH IRTYGGVSRA 180
181 GYVPSCTYPP QLSLNTYQVV NNAIFWIIMA NCVLTIAVLL LNIYKDKRIK KSVFDTKTRY 240
241 NSFENVLTTK AICSVTSTQF VFLSFSTAAL AIIRTLEAGM SEEVFHINIQ YINGGVYGNL 300
301 SIPVLIYLKT NQCILQRRKS IDKMTNHTGT VDSHISSLKT AWET
|
| Detection Method: |  |
| Confidence: | 45.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
