| Protein: | dsl-7 |
| Organism: | Caenorhabditis elegans |
| Length: | 313 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dsl-7.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..13] | [299..1544] |
|
Region A: Residues: [1-313] |
1 11 21 31 41 51
| | | | | |
1 MLTLWSLLLY TFIPLIQCTG YLELRLTSPY VRVLNVSVEL AIGSEKSFYK VPLSPYYELA 60
61 ITNVPIEFDQ PASIIIRSGP VKEIGLTDFV VSPKIFSTRK MSIVPPKAGL PFSGFRIDIK 120
121 CDTNYFGAHC EHFCDEEQAR SMGRRCNILG NIGCPIGVRG SKCDIELPID SGICKCMNGG 180
181 KCVNSFDSKL TADFPICECL NGFEGAACEK QMKIFEPKIS TRLFESTARF HDLANVSVKN 240
241 QLYDDKMDIY SKHVAPSFHV LQQGALNGKA LRAPKKQKNT IIFDPVTLSF HPTKPISTPY 300
301 FPKGRPVRLN SQS
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.44119144078508 | bayes_pls_golite062009 |
| receptor binding | 1.40618339011373 | bayes_pls_golite062009 |
| protein binding | 1.15716342217655 | bayes_pls_golite062009 |
| growth factor activity | 0.25853515067422 | bayes_pls_golite062009 |
