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View Structure Prediction Details

Protein: fce-2
Organism: Caenorhabditis elegans
Length: 266 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fce-2.

Description E-value Query
Range
Subject
Range
Sras-PA - The gene severas is referred to in FlyBase by the symbol Dmel\Sras (CG4852, FBgn0029121). It is a pr...
gi|220954262, gi... - gi|220954262|gb|ACL89674.1| Sras-PA [synthetic construct], gi|220944384|gb|ACL84735.1| Sras-PA [synt...
128.0 [0..2] [262..27]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAGLVSACL PISYVLLVHL FDRNGTDRND PESVKRRFKG ALLSNFVSIV VTAFYLRDYT  60
   61 DSPMLEMGVR WDNIGQSITY PFILMNAFYL GQFVMMQIDR T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LWHYFDWYEW KLCFNSWVWR RDIIVGPITE EIVFRACSST LMAHVYGPTM TILLNPIPFA  60
   61 ASHFHHIWDD QRRGYSLAHS ILQRGFQFCY TYLFGAFATW LQLTTRHAIV PIIAHAFCNA 120
  121 QGLPLWLEIP NYPKRRDRLT LYAAYSVGFA AFVHLLYTRN GMPTP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 9.05061
Match: PF02517.7
Description: No description for PF02517.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle