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View Structure Prediction Details

Protein: pes-22
Organism: Caenorhabditis elegans
Length: 677 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pes-22.

Description E-value Query
Range
Subject
Range
pes-22 - status:Partially_confirmed UniProt:Q2L6X8 protein_id:ABC71825.1
361.0 [0..1] [677..56]

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Predicted Domain #1
Region A:
Residues: [1-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVQQVEPLL VPQAPDGGYG WVIVFAAFMS NLVVDGISTA FSEFKQSYKE RYQESDGLTV  60
   61 FIGSLIIGTY LLVGPLVSAL CNKYEQRYVV MAGGLISGIA FMIAPASPNI YVFMLIYGVM 120
  121 GGLGFGMIYL PAIVVVGFYF DSKRAMATGI SVAGSGVGTF LVPLICQVCI ANLGWQKTIW 180
  181 VLAVMIFSCV FYGYLYRPLP MVDLNEIRDQ EMEPLRQALS KVEDDEDEAV ESPHPNRSTS 240
  241 AASGAIEDEA VSQNPEVQRL RSILTEGDEG SETPKSDAHK VRSHTATRSR KHTMTSNSGS 300
  301 QHDLKLSRGN LSSDNRLSRV SARDFNQSLS KLSKSGGASN LSIAMSGVDP KEFQRPMNRQ 360
  361 DIFYGGSIQN LKEFKEEGTM AGYRASTLSI PRSVVGQAVS QLNLSRTGSR LGGPGIAEDE 420
  421 EEMIEPFVDD GCCKVLPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.221849
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.118997796261274 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [439-677]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMRNALSEMI DLNLLKNKTM MILCISNLLG MMGFYIPIMF LKDLSESMKL DMSLAMFLVP  60
   61 IFGVFNTIGR VFFGWLTDQK ILSALTINNL SLIVSGLLTL ACPLLTSIAG QYFYAIVFGF 120
  121 IISAYICLTS IVLADLMGLE NLTNSFGLLV VARGIASLVG PPFAGIVYDI TGSYDTAFYF 180
  181 GGLVLLVAGL ISATIPFVTK KDADTADLEE EKRKQKQNGV VEEGNEMDDN IPLKSLKNN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.79
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

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