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View Structure Prediction Details

Protein: odd-1
Organism: Caenorhabditis elegans
Length: 242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for odd-1.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
410.0 [0..2] [241..2563]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLPWNTFPG STVPPVVPSV EDIIRMLVAG QQKIAIQNLL QSQSKEQVNG TSHDLQNWLT  60
   61 SLCISPSSSP TPSNASTSTI PAQMTNENVL HLQIQSQLFS NLGTPWFLNP EQHNKTNNAI 120
  121 RKRPKKEFIC KYCARHFTKS YNLMIHERTH TNERPFHCET CGKSFRRQDH LRDHKYIHAK 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.09691
Match: 2i13A
Description: No description for 2i13A was found.

Predicted Domain #2
Region A:
Residues: [181-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKPHKCEICG KGFCQLRTLN VHRSCHHVQE PISETFMLGA IKFGKADSLL IDAEPLIDVT  60
   61 TI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.31
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle