| Protein: | arg-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 349 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for arg-1.
| Description | E-value | Query Range |
Subject Range |
|
|
261.0 | [0..8] | [348..1571] |
|
Region A: Residues: [1-349] |
1 11 21 31 41 51
| | | | | |
1 MSGFSFFITI FLCSIADTNA SGIIELLISS PQSVLIKSTA CASFKCPVHD ELSVPRNVEG 60
61 GVPLRIHIGQ YRGEARQNID LHFEILEPST NEMLALEQHR APSDTKWNTG LPIVIETTLG 120
121 FNVTVHLRNV CTSNYYGKRC NRYCIPSPAL HWECSTNGVR QCAVGWYGDD CSSGVNQIES 180
181 RNIPLLDIKF CSHQNPCANG GVCSTDYKCQ CPSEFLGPRC ETPVSKVHCT LERVCKHGGT 240
241 CVSVNRTNVQ CKCIRGFLGS LCEIGIHGNC SAMRCSVDET CQIRASFAPY HYDNLYFSVC 300
301 VAGLALVASK CKKSEAGPIL PTVVYTASPN TRSTVYKVLS CHNLDNPKK
|
| Detection Method: |  |
| Confidence: | 8.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ErbB-2 class receptor binding | 2.49988032150831 | bayes_pls_golite062009 |
| receptor binding | 2.31571280660349 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 2.14752073450101 | bayes_pls_golite062009 |
| binding | 2.14092582858845 | bayes_pls_golite062009 |
| protein binding | 1.87564165872234 | bayes_pls_golite062009 |
| signal transducer activity | 1.48171797015526 | bayes_pls_golite062009 |
| molecular transducer activity | 1.48171797015526 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 1.08974638257724 | bayes_pls_golite062009 |
| growth factor activity | 0.402016723620225 | bayes_pls_golite062009 |
| pattern binding | 0.0196006376432096 | bayes_pls_golite062009 |
