Protein: | sra-13 |
Organism: | Caenorhabditis elegans |
Length: | 335 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-13.
Description | E-value | Query Range |
Subject Range |
|
192.0 | [0..4] | [315..350] |
Region A: Residues: [1-335] |
1 11 21 31 41 51 | | | | | | 1 MAIISSVNRT CASESLLELY RSYKYILSTS FNIIIPIISL FFLVYAIKQL CAQSIIQYST 60 61 RVLLITTILF AVCHQIAYFC FKADLLYTML FKLDQPCNLQ HSSYDCRFIT IATTTSNCGM 120 121 ALVQLAMSID RVFALKFNRV YYKLKSIPGI TLALITLSIS FSMFFILTID DPLSGYVNHC 180 181 GFYPTYSQDK FHIFLDVTLY LAVFNFVFDI GLMYYSYQEI LWKRSYSFVN RFQSRISLKC 240 241 TQAIFIISIC QCISNVLYSG LLSLLMKLGR YMSSADYNLS LSLAYTTPYS CLILPILICK 300 301 VLEYIKKQRT VGILSLRNQK QSMEGHMAMI NSAWK |
Detection Method: | |
Confidence: | 46.39794 |
Match: | 1f88A |
Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |