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View Structure Prediction Details

Protein: CE36050
Organism: Caenorhabditis elegans
Length: 400 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36050.

Description E-value Query
Range
Subject
Range
gi|20808521, gi|... - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase [Thermoanaerobacter tengcongensis MB4], gi|2...
gi|20808521 - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family [Thermoanaerobacte...
365.0 [0..10] [399..1]

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Predicted Domain #1
Region A:
Residues: [1-400]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPQRFPTST TSASSTILGD RLKFRNGPEA QNRFLKAALT EIQSTYAPNE PKKHGLPTDT  60
   61 ILNIYDKWGN GKYGVILTSN VLVDPTNLES AGNAIIFKEG ESHERRALYT YWAQLMKQDG 120
  121 ALAVMQLSHA GRQTPELVNP SPWSASDVQL VSSARFITYG KPIPLPTELV KTEVVDRFVY 180
  181 AAKYAYECGF DGIQLHGAHG YLFSQFTSPT TNKRTDKYGG SLENRQRIVL EIYDAIRAEI 240
  241 PASTGFLVGI KTNSVEFQNE GLTLEDAKLM CKVYEERGFD FVELSGGTFE KIAFVHERES 300
  301 TRRREAFFVE FAEQIRPVFN KTVVYLTGGF RTAPAMIDAI KSNATQGIGL GRPITAEPDL 360
  361 PKKILEGDVT SAIQDHLPDL QAALRWSRWA EQAWRKLVGM 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.221849
Match: 1gvoA
Description: Pentaerythritol tetranirate reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.94749091175302 bayes_pls_golite062009
oxidoreductase activity 0.579065549387714 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle