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View Structure Prediction Details

Protein: GERM_BACSU
Organism: Bacillus subtilis
Length: 366 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GERM_BACSU.

Description E-value Query
Range
Subject
Range
gi|52349219, gi|... - gi|52786717|ref|YP_092546.1| GerM [Bacillus licheniformis ATCC 14580], gi|52349219|gb|AAU41853.1| Ge...
339.0 [0..1] [366..1]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKGPAVIG ATCLTSALLL SGCGLFQSDK AAEEIDPPQD VTFVNDEAGA NSNTTAAKKT  60
   61 ESEKSDTAKA DQASSTVMRE LYLIDKNGYV VAQTLPLPKS ESTAKQALEY LVQGGPVSEI 120
  121 LPNGFRAVLP ADTTVNVDIK KDGTAIADFS NEFKNYKKED EQKIVQSVTW TLTQFSSIDK 180
  181 VKLRINGHEL KEMPVGGTPI SDDLSRKDGI NLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [214-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAGVNDLTAT HPLTVYYLAE NEDSEYYVPV TKRIDNSEKD DITAAINELA KGPSKVSGLL  60
   61 TDFSEDVKLV SKPKIKDGRV TLDFNQSIFG SADEKTKMIS SEVLNSIVLT LTEQPDVKSV 120
  121 SVKVNGKSEL VNEKGEKLTE PVSRPSQVNT GSF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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