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View Structure Prediction Details

Protein: PYRD_BACSU, PYRD...
Organism: Bacillus subtilis
Length: 311 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PYRD_BACSU, PYRD....

Description E-value Query
Range
Subject
Range
gi|52080156, gi|... - gi|52080156|ref|YP_078947.1| dihydroorotate dehydrogenase 1B [Bacillus licheniformis ATCC 14580], gi...
261.0 [0..1] [311..1]

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Predicted Domain #1
Region A:
Residues: [1-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEVKLPGLD LKNPIIPASG CFGFGKEFSR FYDLSCLGAI MIKATTKEPR FGNPTPRVAE  60
   61 TGAGMLNAIG LQNPGLDSVL HHELPWLEQF DTPIIANVAG SQVDDYVEVA EHISKAPNVH 120
  121 ALELNISCPN VKTGGIAFGT NPEMAADLTK AVKEVSDVPV YVKLSPNVAN ITEIALAIEE 180
  181 AGADGLTMIN TLIGMRLDLK TGKPILANKT GGLSGPAVKP VAIRMVYEVS QMVNIPIIGM 240
  241 GGVQTAEDAL EFLLAGASAV AVGTANFVNP FACPEIIEQL PSVLLQYGYQ SIEECIGRSW 300
  301 NHEKQPAHHR A

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Detection Method: PSI-BLAST
Confidence: 62.69897
Match: 1ep1A
Description: Dihydroorotate dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
dihydroorotate dehydrogenase activity 2.73800716363956 bayes_pls_golite062009
dihydroorotate oxidase activity 2.35584458985229 bayes_pls_golite062009
catalytic activity 1.94749091175302 bayes_pls_golite062009
dihydropyrimidine dehydrogenase (NADP+) activity 1.76080169529176 bayes_pls_golite062009
oxidoreductase activity 1.34004057547793 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 0.708198550325532 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle