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View Structure Prediction Details

Protein: UNG_BACSU
Organism: Bacillus subtilis
Length: 225 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UNG_BACSU.

Description E-value Query
Range
Subject
Range
UNG_AZOVD - Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ung PE=3 SV=1
gi|53611343, gi|... - gi|67153345|ref|ZP_00415090.1| Uracil-DNA glycosylase [Azotobacter vinelandii AvOP], ref|ZP_00090188...
398.0 [0..2] [224..7]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQLLQDSWW NQLKEEFEKP YYQELREMLK REYAEQTIYP DSRDIFNALH YTSYDDVKVV  60
   61 ILGQDPYHGP GQAQGLSFSV KPGVKQPPSL KNIFLELQQD IGCSIPNHGS LVSWAKQGVL 120
  121 LLNTVLTVRR GQANSHKGKG WERLTDRIID VLSERERPVI FILWGRHAQM KKERIDTSKH 180
  181 FIIESTHPSP FSARNGFFGS RPFSRANAYL EKMGEAPIDW CIKDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 1eugA
Description: Uracil-DNA glycosylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
DNA N-glycosylase activity 4.32235853064174 bayes_pls_golite062009
uracil DNA N-glycosylase activity 4.14707882788321 bayes_pls_golite062009
hydrolase activity, hydrolyzing N-glycosyl compounds 3.89636585289546 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 2.84444466513934 bayes_pls_golite062009
hydrolase activity 1.91716804176625 bayes_pls_golite062009
single-strand selective uracil DNA N-glycosylase activity 1.65657095637032 bayes_pls_golite062009
catalytic activity 1.59111295908728 bayes_pls_golite062009
mismatch base pair DNA N-glycosylase activity 0.783383667044285 bayes_pls_golite062009
binding 0.587736812286194 bayes_pls_golite062009
structure-specific DNA binding 0.381118322219236 bayes_pls_golite062009
protein binding 0.272261244770552 bayes_pls_golite062009
nucleic acid binding 0.0311777202379154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle