YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YQJE_BACSU
Organism: Bacillus subtilis
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YQJE_BACSU.

Description E-value Query
Range
Subject
Range
gi|52004145, gi|... - gi|52786309|ref|YP_092138.1| YqjE [Bacillus licheniformis ATCC 14580], gi|52348811|gb|AAU41445.1| Yq...
282.0 [0..2] [370..1]

Back

Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNEKRLLEE FLELVQIDSE TKHEAEICKV LKRKFSDLGV DVKEDDTMDI TGHGAGNLIC  60
   61 TLKGTKQTDT IYFTSHMDTV VPGNGVKPVV ENGYVKTDGT TILGADDKAG LAAMFEAIKV 120
  121 LKEENIEHGT IEFIITVGEE SGLIGAKALD RPMITASYGY ALDSDGKVGN IIVAAPTQAK 180
  181 VRAAIFGKTA HAGVEPEKGI SAITIASKAI SKMPLGRIDE ETTANIGRFE GGTQTNIVCD 240
  241 EVHILAEARS LVPEKMEAQV QKMKAAFEEA AADMGGRAEV EIEVMYPGFK YQDGDQVVEI 300
  301 AKKAAAKIGR PSELQTSGGG SDANVIAGHG IPTVNLAVGY EQIHTKNEKM PIEELVKTAE 360
  361 MVVAIIEEAA K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.69897
Match: 1ysjA
Description: Crystal Structure of Bacillus Subtilis YXEP Protein (APC1829), a Dinuclear Metal Binding Peptidase from M20 Family
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.17104798571343 bayes_pls_golite062009
peptidase activity 2.99879418448481 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.36949934818383 bayes_pls_golite062009
catalytic activity 2.00064748759729 bayes_pls_golite062009
exopeptidase activity 0.960517137038552 bayes_pls_golite062009
binding 0.456088952797852 bayes_pls_golite062009
carboxypeptidase activity 0.389857234977383 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle