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View Structure Prediction Details

Protein: BCCP1_ARATH
Organism: Arabidopsis thaliana
Length: 280 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCCP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|25293930 - pir||A83978 pyruvate carboxylase pycA [imported] - Bacillus halodurans (strain C-125)
gi|10175246, gi|... - gi|15615188|ref|NP_243491.1| pyruvate carboxylase [Bacillus halodurans C-125], gi|10175246|dbj|BAB06...
205.0 [0..1] [279..877]

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Predicted Domain #1
Region A:
Residues: [1-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSFSVTS PAAAASVYAV TQTSSHFPIQ NRSRRVSFRL SAKPKLRFLS KPSRSSYPVV  60
   61 KAQSNKVSTG ASSNAAKVDG PSSAEGKEKN SLKESSASSP ELATEESISE FLTQVTTLVK 120
  121 LVDSRDIVEL QLKQLDCELV IRKKEALPQP QAPASYVMMQ QPNQPSYAQQ MAPPAAPAAA 180
  181 APAPSTPASL PPPSPPTPAK SSLPTVKSPM AGTFYRSPAP GEPPFIKVGD KVQKGQVLCI 240
  241 VEAMKLMNEI ESDHTGTVVD IVAEDGKPVS LDTPLFVVQP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.522879
Match: 2qf7A
Description: No description for 2qf7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle