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View Structure Prediction Details

Protein: E133_ARATH
Organism: Arabidopsis thaliana
Length: 501 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for E133_ARATH.

Description E-value Query
Range
Subject
Range
gi|115311491 - gi|115311491|gb|ABI93926.1| At1g66250 [Arabidopsis thaliana]
454.0 [0..20] [492..29]

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Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALLLLFLF LFASSALSQD SLIGVNIGTE VTNMPSPTQV VALLKSQNIN RVRLYDADRS  60
   61 MLLAFAHTGV QVIISVPNDQ LLGISQSNAT AANWVTRNVA AYYPATNITT IAVGSEVLTS 120
  121 LTNAASVLVS ALKYIQAALV TANLDRQIKV STPHSSTIIL DSFPPSQAFF NKTWDPVIVP 180
  181 LLKFLQSTGS PLLLNVYPYF DYVQSNGVIP LDYALFQPLQ ANKEAVDANT LLHYTNVFDA 240
  241 IVDAAYFAMS YLNFTNIPIV VTESGWPSKG GPSEHDATVE NANTYNSNLI QHVINKTGTP 300
  301 KHPGTAVTTY IYELYNEDTR PGPVSEKNWG LFYTNGTPVY TLRLAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.522879
Match: 2cygA
Description: Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.32563207632796 bayes_pls_golite062009
hydrolase activity 0.85514037342026 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.80912338090552 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.41375210927547 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [347-501]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGAILANDTT NQTFCIAKEK VDRKMLQAAL DWACGPGKVD CSALMQGESC YEPDDVVAHS  60
   61 TYAFNAYYQK MGKASGSCDF KGVATVTTTD PSRGTCVFPG SAKSNQTLGN NTSALAPSAN 120
  121 STTSGCIPKY YHHPHASFGD LTLLSLLLII ALVFL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 51.744727
Match: PF07983.4
Description: No description for PF07983.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle