Protein: | EF1D1_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 231 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF1D1_ARATH.
Description | E-value | Query Range |
Subject Range |
|
254.0 | [0..2] | [231..132] |
Region A: Residues: [1-93] |
1 11 21 31 41 51 | | | | | | 1 MAAFPNLNSD AGLKKLDEHL LTRSYITGYQ ASKDDITVFA ALAKPPTSQY VNASRWYNHI 60 61 DALLRISGVS AEGSGVIVEG SAPITEEAVA TPP |
Detection Method: | |
Confidence: | 6.39794 |
Match: | 1aw9A |
Description: | STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.30738165079783 | bayes_pls_golite062009 |
transferase activity | 1.05573069897577 | bayes_pls_golite062009 |
catalytic activity | 0.963623964325467 | bayes_pls_golite062009 |
protein binding | 0.816387415768278 | bayes_pls_golite062009 |
nucleic acid binding | 0.46030380837916 | bayes_pls_golite062009 |
transferase activity, transferring alkyl or aryl (other than methyl) groups | 0.44372379417457 | bayes_pls_golite062009 |
transcription regulator activity | 0.385619646192102 | bayes_pls_golite062009 |
glutathione transferase activity | 0.20688408808374 | bayes_pls_golite062009 |
DNA binding | 0.175092771820973 | bayes_pls_golite062009 |
Region A: Residues: [94-231] |
1 11 21 31 41 51 | | | | | | 1 AADSKDAAAD EEDDDDVDLF GEETEEEKKA AEERAASVKA STKKKESGKS SVLIDIKPWD 60 61 DETDMKKLEE AVKSIQMEGL FWGASKLVPV GYGIKKLQIL CTIVDDLVSI DTMIEEQLTV 120 121 EPINEYVQSC DIVAFNKI |
Detection Method: | |
Confidence: | 36.154902 |
Match: | 1b64A |
Description: | SOLUTION STRUCTURE OF THE GUANINE NUCLEOTIDE EXCHANGE FACTOR DOMAIN FROM HUMAN ELONGATION FACTOR-ONE BETA, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
translation elongation factor activity | 12.3173391557088 | bayes_pls_golite062009 |
translation factor activity, nucleic acid binding | 7.81664120156021 | bayes_pls_golite062009 |
translation regulator activity | 7.77673515271111 | bayes_pls_golite062009 |
actin binding | 3.32293986705361 | bayes_pls_golite062009 |
cytoskeletal protein binding | 2.89895269798148 | bayes_pls_golite062009 |
binding | 2.68915238463415 | bayes_pls_golite062009 |
nucleic acid binding | 2.61354904861592 | bayes_pls_golite062009 |
protein binding | 0.897731859503126 | bayes_pls_golite062009 |
GTPase regulator activity | 0.398118288595674 | bayes_pls_golite062009 |
guanyl-nucleotide exchange factor activity | 0.315265787470263 | bayes_pls_golite062009 |
nucleoside-triphosphatase regulator activity | 0.135573965021144 | bayes_pls_golite062009 |