| Protein: | EF1D2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 231 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF1D2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
255.0 | [0..2] | [231..132] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MAAFPNLNSG SGLKKLDEHL LTRSYITGYQ ASKDDITVFT ALSKPPTSEF VNVSRWFNHI 60
61 DALLRISGVS AEGSGVIVEG SSPITEEAVA TPPAADSKDT AAEEEDDDDV DLFGEETEEE 120
121 KKAAEERAAS VKASTKKK
|
| Detection Method: |  |
| Confidence: | 3.221849 |
| Match: | 1ljrA |
| Description: | Class theta GST |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.30738165079783 | bayes_pls_golite062009 |
| catalytic activity | 0.963623964325467 | bayes_pls_golite062009 |
| protein binding | 0.816387415768278 | bayes_pls_golite062009 |
| nucleic acid binding | 0.46030380837916 | bayes_pls_golite062009 |
| transferase activity, transferring alkyl or aryl (other than methyl) groups | 0.44372379417457 | bayes_pls_golite062009 |
| transcription regulator activity | 0.385619646192102 | bayes_pls_golite062009 |
| transferase activity | 0.352222179598631 | bayes_pls_golite062009 |
| glutathione transferase activity | 0.20688408808374 | bayes_pls_golite062009 |
| DNA binding | 0.175092771820973 | bayes_pls_golite062009 |
|
Region A: Residues: [139-231] |
1 11 21 31 41 51
| | | | | |
1 ESGKSSVLMD IKPWDDETDM KKLEEAVRSI QMEGLFWGAS KLVPVGYGIK KLHIMCTIVD 60
61 DLVSIDTMIE EQLTVEPINE YVQSCDIVAF NKI
|
| Detection Method: | |
| Confidence: | 36.09691 |
| Match: | 1b64A |
| Description: | SOLUTION STRUCTURE OF THE GUANINE NUCLEOTIDE EXCHANGE FACTOR DOMAIN FROM HUMAN ELONGATION FACTOR-ONE BETA, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation elongation factor activity | 12.3173391557088 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 7.81664120156021 | bayes_pls_golite062009 |
| translation regulator activity | 7.77673515271111 | bayes_pls_golite062009 |
| actin binding | 3.32293986705361 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.89895269798148 | bayes_pls_golite062009 |
| binding | 2.68915238463415 | bayes_pls_golite062009 |
| nucleic acid binding | 2.61354904861592 | bayes_pls_golite062009 |
| protein binding | 0.897731859503126 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.398118288595674 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.315265787470263 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.135573965021144 | bayes_pls_golite062009 |
