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View Structure Prediction Details

Protein: GASA4_ARATH
Organism: Arabidopsis thaliana
Length: 106 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GASA4_ARATH.

Description E-value Query
Range
Subject
Range
gi|950099 - gi|950099|gb|AAA74480.1| gibberellin-regulated
134.0 [0..1] [106..1]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSYGAIFL LTLIVLFMLQ TMVMASSGSN VKWSQKRYGP GSLKRTQCPS ECDRRCKKTQ  60
   61 YHKACITFCN KCCRKCLCVP PGYYGNKQVC SCYNNWKTQE GGPKCP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 64.236572
Match: PF02704.5
Description: No description for PF02704.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.453 N/A N/A a.112.1 Description not found.
View Download 0.398 N/A N/A a.74.1 Cyclin-like
View Download 0.359 N/A N/A a.112.1 Description not found.
View Download 0.353 N/A N/A d.39.1 Dynein light chain 8 (DLC8)
View Download 0.324 N/A N/A f.14.1 Voltage-gated potassium channels


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle