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View Structure Prediction Details

Protein: GLT1_ARATH
Organism: Arabidopsis thaliana
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLT1_ARATH.

Description E-value Query
Range
Subject
Range
GL22_ARATH - Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1
221.0 [0..6] [219..1]
NEC1_NICPL - Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1
220.0 [0..1] [219..1]
gi|125535819 - gi|125535819|gb|EAY82307.1| hypothetical protein OsI_37517 [Oryza sativa Indica Group]
GL122_ORYSJ - Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1
219.0 [0..6] [219..1]
NEC1_NICLS - Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1
216.0 [0..1] [219..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD  60
   61 FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN VELAPGGVNP PHLHPRATEV 120
  121 GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG 180
  181 AVVLPSTLFG SKPEIPNAVL TRAFRTDDTT VQNLKSKFAV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.522879
Match: 2et7A
Description: Structural and spectroscopic insights into the mechanism of oxalate oxidase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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