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View Structure Prediction Details

Protein: PER52_ARATH
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER52_ARATH.

Description E-value Query
Range
Subject
Range
gi|39777532 - gi|39777532|gb|AAR31106.1| peroxidase precursor [Quercus suber]
381.0 [0..1] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM  60
   61 GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN SARGFNVIDN IKSAVEKACP 120
  121 GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF 180
  181 SAVGLSTRDM VALSGAHTIG QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL 240
  241 APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM 300
  301 IKMGDISPLT GSSGEIRKVC GRTN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.69897
Match: 1schA
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle