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View Structure Prediction Details

Protein: PORC_ARATH
Organism: Arabidopsis thaliana
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PORC_ARATH.

Description E-value Query
Range
Subject
Range
gi|79316418 - gi|79316418|ref|NP_001030948.1| POR C (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE); NADPH dehydrogenase/ oxi...
290.0 [0..1] [401..1]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQAAYSLL PSTISIQKEG KFNASLKETT FTGSSFSNHL RAEKISTLLT IKEQRRQKPR  60
   61 FSTGIRAQTV TATPPANEAS PEQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.522879
Match: 2z5lA
Description: No description for 2z5lA was found.

Predicted Domain #2
Region A:
Residues: [85-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTERKGTAVI TGASSGLGLA TAKALADTGK WHVIMACRNF LKAEKAARSV GMSKEDYTVM  60
   61 HLDLASLESV KQFVENFRRT EQPLDVLVCN AAVYQPTAKE PSFTAEGFEI SVGTNHLGHF 120
  121 LLSRLLLDDL KKSDYPSKRM IIVGSITGNT NTLAGNVPPK ANLGDLRGLA SGLNGQNSSM 180
  181 IDGGEFDGAK AYKDSKVCNM LTMQELHRRY HEETGVTFAS LYPGCIATTG LFREHIPLFR 240
  241 LLFPPFQKYI TKGYVSEEEA GKRLAQVVSD PSLGKSGVYW SWNNNSSSFE NQLSKEASDA 300
  301 EKAKKLWEVS EKLVGLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.69897
Match: 2hq1A
Description: No description for 2hq1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle