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View Structure Prediction Details

Protein: PSK6_ARATH
Organism: Arabidopsis thaliana
Length: 81 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSK6_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593669 - gi|21593669|gb|AAM65636.1| unknown [Arabidopsis thaliana]
110.0 [0..1] [81..1]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQSLCLAVL FLILSTSSSA IRRGKEDQEI NPLVSATSVE EDSVNKLMGM EYCGEGDEEC  60
   61 LRRRMMTESH LDYIYTQHHK H

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.638272
Match: PF06404.3
Description: No description for PF06404.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.754 N/A N/A a.6.1 Putative DNA-binding domain
View Download 0.734 N/A N/A a.23.5 Hemolysin expression modulating protein HHA
View Download 0.715 N/A N/A a.44.1 Disulphide-bond formation facilitator (DSBA), insertion domain
View Download 0.662 N/A N/A a.108.1 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
View Download 0.594 N/A N/A a.144.1 PABC (PABP) domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle