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View Structure Prediction Details

Protein: SUVH3_ARATH
Organism: Arabidopsis thaliana
Length: 669 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUVH3_ARATH.

Description E-value Query
Range
Subject
Range
gi|13517747 - gi|13517747|gb|AAK28968.1|AF344446_1 SUVH3 [Arabidopsis thaliana]
680.0 [0..1] [669..1]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF  60
   61 PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG PSSSSGTKRG VGRPKGTTSV 120
  121 KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [166-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLMRFDAVRR RLSQVEFTKS ATSKAAGTLM SNGVRTNMKK RVGTVPGIEV GDIFFSRIEM  60
   61 CLVGLHMQTM AGIDYIISKA GSDEESLATS IVSSGRYEGE AQDPESLIYS GQGGNADKNR 120
  121 QASDQKLERG NLALENSLRK GNGVRVVRGE EDAASKTGKI YIYDGLYSIS ESWVEKGK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 48.853872
Match: PF02182.8
Description: No description for PF02182.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [344-669]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGCNTFKYKL VRQPGQPPAF GFWKSVQKWK EGLTTRPGLI LPDLTSGAES KPVSLVNDVD  60
   61 EDKGPAYFTY TSSLKYSETF KLTQPVIGCS CSGSCSPGNH NCSCIRKNDG DLPYLNGVIL 120
  121 VSRRPVIYEC GPTCPCHASC KNRVIQTGLK SRLEVFKTRN RGWGLRSWDS LRAGSFICEY 180
  181 AGEVKDNGNL RGNQEEDAYV FDTSRVFNSF KWNYEPELVD EDPSTEVPEE FNLPSPLLIS 240
  241 AKKFGNVARF MNHSCSPNVF WQPVIREGNG ESVIHIAFFA MRHIPPMAEL TYDYGISPTS 300
  301 EARDESLLHG QRTCLCGSEQ CRGSFG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.69897
Match: 2igqA
Description: No description for 2igqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle