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View Structure Prediction Details

Protein: THN24_ARATH
Organism: Arabidopsis thaliana
Length: 134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for THN24_ARATH.

Description E-value Query
Range
Subject
Range
gi|1076463, gi|8... - gi|802168|gb|AAB33009.1| crambin precursor=thionin variant Thi2Ca10 [Crambe abyssinica, seeds, Pepti...
191.0 [0..1] [134..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKTLIVSV LIMSLFMAQN QVDANICCPS IQARTFYNAC LFAVGSPSSC IRNSSCLDIS  60
   61 ESTCPRGYTN DILENTGDAV TEYCKLGCVS SVCGALTILQ NSDASEIVNG EVEKCTMACS 120
  121 TVCTKGSMNA VENA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.678 a.29.4 RecG, N-terminal domain
View Download 0.577 a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.465 a.40.1 Calponin-homology domain, CH-domain
View Download 0.430 a.118.1 ARM repeat
View Download 0.419 d.26.1 FKBP-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle