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View Structure Prediction Details

Protein: UMP2_ARATH
Organism: Arabidopsis thaliana
Length: 113 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UMP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592886 - gi|21592886|gb|AAM64836.1| F1F0-ATPase inhibitor protein [Arabidopsis thaliana]
142.0 [0..1] [113..1]

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Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRNALRIV SRRFSSGKVL SEEERAAENV FIKKMEQEKL QKLARQGPGE QAAGSASEAK  60
   61 VAGATASASA ESGPKVSEDK NRNYAVVAGV VAIVGSIGWY LKAGGKKQPE VQE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.865 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.741 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.656 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.644 a.118.11 Cytochrome c oxidase subunit E
View Download 0.624 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle