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View Structure Prediction Details

Protein: AGD7_ARATH
Organism: Arabidopsis thaliana
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGD7_ARATH.

Description E-value Query
Range
Subject
Range
AGD6_ARATH - Probable ADP-ribosylation factor GTPase-activating protein AGD6 OS=Arabidopsis thaliana GN=AGD6 PE=1...
239.0 [0..1] [456..1]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT  60
   61 MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN SNAASVYRDR IQALAEGRQW 120
  121 RDPPIVKES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.39794
Match: 2iqjA
Description: No description for 2iqjA was found.

Predicted Domain #2
Region A:
Residues: [130-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGGGLMNKKP PLSQGGGRDS GNGGWDNWDN DDSFRSTDMR RNQSAGDFRS SGGRGAPAKS  60
   61 KSSEDIYSRS QLEASAANKE SFFAKRMAEN ESKPEGLPPS QGGKYVGFGS SPGPAPRSNQ 120
  121 QSGGGDVFSV MSEGFGRLSL VAASAANVVQ TGTMEFTSKV KEGGLDQTVS ETVNVVASKT 180
  181 TEIGQRTWGI MKGVMAIA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [328-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQKVEEFTKE EASTWNQQNK TEGNGYYQNS GIGNKTANSS FGGSQSSSSG HNNSYRNSNS  60
   61 WDDWGEENNS KKEAAPKVST SNDDDDGGWA GWDDNDAKDD DFYYQPASDK KSVGHNGKSD 120
  121 TAWTGGGFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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