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View Structure Prediction Details

Protein: gi|4678952, gi|1...
Organism: Arabidopsis thaliana
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4678952, gi|1....

Description E-value Query
Range
Subject
Range
gi|1076265, gi|4... - gi|414200|emb|CAA53243.1| chloroplast outer envelope 24 kD protein (omp24) [Spinacia oleracea], pir|...
105.0 [0..58] [145..67]
gi|18844859, gi|... - gi|34905952|ref|NP_914323.1| OJ1656_A11.17 [Oryza sativa (japonica cultivar-group)], gi|215737099|db...
105.0 [0..52] [128..18]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEAQVDRS NGSDSSSPPI KLPPFITNLF AFLQPKPPPA TIDANAPKPT GEKEPLKSTY  60
   61 ETVTFPYNPP KSAEPIKFEA EPSSGRTSNS VILWQVYALG GFLVLKWAWA RWNERNERSD 120
  121 KKEATGDDDQ KDDDEDDQSS DGHED

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 1zzaA
Description: Solution NMR Structure of the Membrane Protein Stannin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle