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View Structure Prediction Details

Protein: PKS4_ARATH
Organism: Arabidopsis thaliana
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PKS4_ARATH.

Description E-value Query
Range
Subject
Range
gi|47825031 - gi|47825031|gb|AAT38801.1| Putative phytochrome kinase substrate 1, identical [Solanum demissum]
427.0 [0..27] [379..14]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQTTVTVVA TKRDALDPYI KILQNRSNDI DVSFSSYLKP DNNEQQQKEN EDTELSIFEA  60
   61 RSYFSENGSN DSRCQTRNLS GPRFSSVASA KVSSFTVGQT ASSEASWNSQ TGLLSNKNRQ 120
  121 GSDRDGRRSS KKGPRWFFRR RACPCSSSKS VQVQESKPRI AVPKTGSDRI VSNRIVHSHQ 180
  181 TISSPEPIRL TIPSNTVTRS IDYTANKEAR APVSNFSFPT LNETSQLSEN PKNPVLNHIK 240
  241 PVRIEPALLP IKPVLN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [257-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTSPKGVIID EEATSDASSD LFEIESFSTQ TAARPWAPPV RDSMEETVSE YGYEPSEASV  60
   61 TWSVMTAEPA SAVAANFSRI ALSSSSTAFS GYDKKRTGLL NCHCEKAVMV NGDKRLVQPV 120
  121 KSVGVQNDVA GKVLCNNGSS KLSVTSRPRQ 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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