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View Structure Prediction Details

Protein: SUS4_ARATH
Organism: Arabidopsis thaliana
Length: 808 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SUS4_ARATH.

Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET  60
   61 QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV RVNLHDLVVE ELQASEYLQF 120
  121 KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKESLHPLLK FLRLHSHEGK TLMLNNRIQN LNTLQHNLRK AEEYLMELKP ETLYSEFEHK  60
   61 FQEIGLERGW GDTAERVLNM IRLLLDLLEA PDPCTLENFL GRIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [277-808]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFNVVILSP HGYFAQDNVL GYPDTGGQVV YILDQVRALE TEMLQRIKQQ GLNITPRILI  60
   61 ITRLLPDAAG TTCGQRLEKV YGSQYCDILR VPFRTEKGIV RKWISRFEVW PYLETFTEDV 120
  121 AAEISKELQG KPDLIIGNYS DGNLVASLLA HKLGVTQCTI AHALEKTKYP DSDIYWKKLD 180
  181 EKYHFSCQFT ADLIAMNHTD FIITSTFQEI AGSKDTVGQY ESHRSFTLPG LYRVVHGIDV 240
  241 FDPKFNIVSP GADMSIYFAY TEEKRRLTAF HLEIEELLYS DVENEEHLCV LKDKKKPIIF 300
  301 TMARLDRVKN LSGLVEWYGK NTRLRELVNL VVVGGDRRKE SQDNEEKAEM KKMYELIEEY 360
  361 KLNGQFRWIS SQMNRVRNGE LYRYICDTKG AFVQPALYEA FGLTVVEAMT CGLPTFATCN 420
  421 GGPAEIIVHG KSGFHIDPYH GDKAAESLAD FFTKCKHDPS HWDQISLGGL ERIQEKYTWQ 480
  481 IYSQRLLTLT GVYGFWKHVS NLDRLESRRY LEMFYALKYR PLAQAVPLAH EE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.69897
Match: 2r60A
Description: No description for 2r60A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle