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View Structure Prediction Details

Protein: EIN2_ARATH
Organism: Arabidopsis thaliana
Length: 1294 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for EIN2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAEIVNVRP QLGFIQRMVP ALLPVLLVSV GYIDPGKWVA NIEGGARFGY DLVAITLLFN  60
   61 FAAILCQYVA ARISVVTGKH LAQICNEEYD KWTCMFLGIQ AEFSAILLDL TMVVGVAHAL 120
  121 NLLFGVELST GVFLAAMDAF LFPVFASFLE NGMANTVSIY SAGLVLLLYV SGVLLSQSEI 180
  181 PLSMNGVLTR LNGESAFALM GLLGASIVPH NFYIHSYFAG ESTSSSDVDK SSLCQDHLFA 240
  241 IFGVFSGLSL VNYVLMNAAA NVFHSTGLVV LTFHDALSLM EQVFMSPLIP VVFLMLLFFS 300
  301 SQITALAWAF GGEVVLHDFL KIEIPAWLHR ATIRILAVAP ALYCVWTSGA DGIYQLLIFT 360
  361 QVLVAMMLPC SVIPLFRIAS SRQIMG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 122.0
Match: 1be3C
Description: Mitochondrial cytochrome b subunit, C-terminal domain; Mitochondrial cytochrome b subunit, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [387-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VHKIPQVGEF LALTTFLGFL GLNVVFVVEM VFGSSDWAGG LRWNTVMGTS IQYTTLLVSS  60
   61 CASLCLILWL AATPLKSASN RAEAQIWNMD AQNALSYPSV QEEEIERTET RRNEDESIVR 120
  121 LESRVKDQLD TTSVTSSVYD LPENI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [532-736]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LMTDQEIRSS PPEERELDVK YSTSQVSSLK EDSDVKEQSV LQSTVVNEVS DKDLIVETKM  60
   61 AKIEPMSPVE KIVSMENNSK FIEKDVEGVS WETEEATKAA PTSNFTVGSD GPPSFRSLSG 120
  121 EGGSGTGSLS RLQGLGRAAR RHLSAILDEF WGHLYDFHGQ LVAEARAKKL DQLFGTDQKS 180
  181 ASSMKADSFG KDISSGYCMS PTAKG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [737-950]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSQMTSSLY DSLKQQRTPG SIDSLYGLQR GSSPSPLVNR MQMLGAYGNT TNNNNAYELS  60
   61 ERRYSSLRAP SSSEGWEHQQ PATVHGYQMK SYVDNLAKER LEALQSRGEI PTSRSMALGT 120
  121 LSYTQQLALA LKQKSQNGLT PGPAPGFENF AGSRSISRQS ERSYYGVPSS GNTDTVGAAV 180
  181 ANEKKYSSMP DISGLSMSAR NMHLPNNKSG YWDP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [951-1050]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSGGGGYGAS YGRLSNESSL YSNLGSRVGV PSTYDDISQS RGGYRDAYSL PQSATTGTGS  60
   61 LWSRQPFEQF GVAERNGAVG EELRNRSNPI NIDNNASSNV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [1051-1207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAEAKLLQSF RHCILKLIKL EGSEWLFGQS DGVDEELIDR VAAREKFIYE AEAREINQVG  60
   61 HMGEPLISSV PNCGDGCVWR ADLIVSFGVW CIHRVLDLSL MESRPELWGK YTYVLNRLQG 120
  121 VIDPAFSKLR TPMTPCFCLQ IPASHQRASP TSANGML

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1208-1294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPAAKPAKGK CTTAVTLLDL IKDVEMAISC RKGRTGTAAG DVAFPKGKEN LASVLKRYKR  60
   61 RLSNKPVGMN QDGPGSRKNV TAYGSLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle