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View Structure Prediction Details

Protein: gi|6573725, gi|2...
Organism: Arabidopsis thaliana
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6573725, gi|2....

Description E-value Query
Range
Subject
Range
gi|15982771 - gi|15982771|gb|AAL09733.1| At1g76160/T23E18_10 [Arabidopsis thaliana]
448.0 [0..1] [541..1]

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Predicted Domain #1
Region A:
Residues: [1-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI  60
   61 HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG TTCPIPPGKN YTYILQMKDQ 120
  121 IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL 180
  181 DNGKKLPLPD GILINGRSSG ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG 240
  241 THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV 300
  301 SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD 360
  361 GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP TGGGIYLDTS VMQVDYRTFV 420
  421 EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI 480
  481 LIALDNVGMW NLRSEFWARQ YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP 540
  541 L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.30103
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle