| Protein: | C3H2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 393 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
265.0 | [0..1] | [393..1] |
|
|
198.0 | [0..4] | [367..150] |
|
|
195.0 | [0..4] | [367..158] |
|
|
195.0 | [0..4] | [367..190] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MDVVCTEHQM RKPTVEIPPR KLLLSSKSFP SDSSSPRSPR KHNWNKSNKI TSEHEEDNED 60
61 NNRENKEYCY DSDSDDP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.385 | a.118.1 | ARM repeat |
| View | Download | 0.338 | a.22.1 | Histone-fold |
| View | Download | 0.309 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.282 | g.37.1 | C2H2 and C2HC zinc fingers |
| View | Download | 0.279 | d.58.18 | Regulatory domain in the aminoacid metabolism |
|
Region A: Residues: [78-140] |
1 11 21 31 41 51
| | | | | |
1 YASDHFRMFE FKIRRCTRSR SHDWTDCPFA HPGEKARRRD PRRFQYSGEV CPEFRRGGDC 60
61 SRG
|
| Detection Method: | |
| Confidence: | 20.09691 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [141-202] |
1 11 21 31 41 51
| | | | | |
1 DDCEFAHGVF ECWLHPIRYR TEACKDGKHC KRKVCFFAHS PRQLRVLPPE NVSGVSASPS 60
61 PA
|
| Detection Method: | |
| Confidence: | 3.04 |
| Match: | 2e5sA |
| Description: | No description for 2e5sA was found. |
|
Region A: Residues: [203-393] |
1 11 21 31 41 51
| | | | | |
1 AKNPCCLFCS SSPTSTLLGN LSHLSRSPSL SPPMSPANKA AAFSRLRNRA ASAVSAAAAA 60
61 GSMNYKDVLS ELVNSLDSMS LAEALQASSS SPVTTPVSAA AAAFASSCGL SNQRLHLQQQ 120
121 QPSSPLQFAL SPSTPSYLTN SPQANFFSDD FTPRRRQMND FTAMTAVREN TNIEDGSCGD 180
181 PDLGWVNDLL T
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
